Following the former Godolphin trainer’s eight-year ban for administering banned drugs to 15 horses in his care, the British Horseracing Authority tested every inmate at his Moulton Paddocks yard in Newmarket.
Those checks produced positive tests for another seven horses, including the Doncaster winner, with the steroid stanozolol found to be in their blood samples.
Testing at the other Godolphin yard of Saeed bin Suroor returned no positive results for banned substances, the BHA said yesterday.
Encke will now be suspended from running for six months, meaning he cannot return to action until October 29, when only a few weeks of the Flat season remain.
The other six horses – Energizer, Genius Beast, Improvisation, Stamford, Steeler and Zip Top – will also be barred from racing until that date.
Encke made great strides in 2012, graduating from a Sandown handicap via Group-race places at Goodwood and York to foil the Triple Crown bid of Camelot.
In beating Aidan O’Brien’s charge by three-quarters of a length, Encke ended Camelot’s chances of emulating Nijinsky, who was the winner of the 2000 Guineas, Derby and Leger in 1970.
The BHA said Encke was routinely tested after finishing third in the Great Voltigeur at York and after his Doncaster triumph, with the colt returning negative results on both occasions.
Given his negative post-race test last September, the BHA said it was satisfied Encke was clear of any banned substances when landing his Classic success and would not be disqualified.
Al Zarooni has lodged an appeal against the severity of his initial suspension and the BHA has confirmed it will not take any further action until that matter is resolved, with the last week in June currently mooted as a potential hearing date.
Adam Brickell, director of integrity, legal and risk for the BHA, said: “We will not be taking any separate action in respect of these additional positive results whilst Mr Al Zarooni’s appeal process is on-going.
“In the meantime, the latest findings from HFL Sport Science will form the subject of further interviews as part of the BHA’s continuing investigation.
“From the outset, one of the aims of the investigation, in addition to trying to understand the environment within which such serious breaches came to be committed, has been to identify what measures are needed to ensure the yard operates in accordance with the Rules in future.
“The findings will be shared with Godolphin and will also assist the BHA with regard to the future licensing of the yard.”
Paul Bittar, the BHA chief executive, said: “These test results endorse the swift action and measures taken by the BHA in this matter.”